Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

GATK process banner

Need Help?

Search our documentation

Community Forum

Hi, How can we help?

Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

SoftClippedReadFilter Follow

2 comments

  • Avatar
    joy bordini

    Hi there,

     

    I have a question: Is this function already available? Can you please provide an example line code and required arguments please

    0
    Comment actions Permalink
  • Avatar
    François Kroll

    Same here I'm afraid.

    I pulled v4.2.0.0 as a docker, but cannot see this command available?

    An example usage would also be greatly appreciated!

    0
    Comment actions Permalink

Please sign in to leave a comment.

Powered by Zendesk