Filter out reads where the read and CIGAR do not match in length
Category Read Filters
OverviewFilter out reads where the read and CIGAR do not match in length.
Note: unmapped reads pass this filter. See MappedReadFilter for criteria defining an unmapped read.
See these additional references.
GATK version 188.8.131.52-1-gf548ccd-SNAPSHOT built at Mon, 2 Aug 2021 14:22:45 -0700.