Keep only reads whose strand is as specified
Category Read Filters
OverviewKeep only reads whose strand is either forward (not 0x10) or reverse (0x10), as specified.
By default the filter keeps only forward reads (not 0x10).
ReadStrandFilter specific arguments
This table summarizes the command-line arguments that are specific to this tool. For more details on each argument, see the list further down below the table or click on an argument name to jump directly to that entry in the list.
|Argument name(s)||Default value||Summary|
||Keep only reads on the reverse strand|
Arguments in this list are specific to this tool. Keep in mind that other arguments are available that are shared with other tools (e.g. command-line GATK arguments); see Inherited arguments above.
Keep only reads on the reverse strand
R Boolean null
GATK version 22.214.171.124-SNAPSHOT built at Fri, 24 Apr 2020 12:01:12 -0400.