Filter out reads where the read and CIGAR do not match in length
Category Read Filters
OverviewFilter out reads where the read and CIGAR do not match in length.
Note: unmapped reads pass this filter. See MappedReadFilter for criteria defining an unmapped read.
See these additional references.
GATK version 18.104.22.168-SNAPSHOT built at Thu, 2 Apr 2020 14:54:17 -0400.