Keep only reads from the specified read group
Category Read Filters
OverviewKeep only reads from the specified read group. Discards reads lacking an RG tag.
Matching is done by case-sensitive exact match.
ReadGroupReadFilter specific arguments
This table summarizes the command-line arguments that are specific to this tool. For more details on each argument, see the list further down below the table or click on an argument name to jump directly to that entry in the list.
|Argument name(s)||Default value||Summary|
||null||The name of the read group to keep|
Arguments in this list are specific to this tool. Keep in mind that other arguments are available that are shared with other tools (e.g. command-line GATK arguments); see Inherited arguments above.
--keep-read-group / NA
The name of the read group to keep
R String null
GATK version 22.214.171.124-SNAPSHOT built at Thu, 2 Apr 2020 14:54:17 -0400.