Keep only reads from the specified read group
Category Read Filters
Overview
Keep only reads from the specified read group. Discards reads lacking an RG tag.Matching is done by case-sensitive exact match.
ReadGroupReadFilter specific arguments
This table summarizes the command-line arguments that are specific to this tool. For more details on each argument, see the list further down below the table or click on an argument name to jump directly to that entry in the list.
Argument name(s) | Default value | Summary | |
---|---|---|---|
Required Arguments | |||
--keep-read-group |
null | The name of the read group to keep |
Argument details
Arguments in this list are specific to this tool. Keep in mind that other arguments are available that are shared with other tools (e.g. command-line GATK arguments); see Inherited arguments above.
--keep-read-group / NA
The name of the read group to keep
R String null
GATK version 4.0.2.0 built at 02-13-2019 02:13:49.
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