Filter out reads where the read and CIGAR do not match in length
Category Read Filters
OverviewFilter out reads where the read and CIGAR do not match in length.
Note: unmapped reads pass this filter. See MappedReadFilter for criteria defining an unmapped read.
See these additional references.
GATK version 184.108.40.206 built at 27-28-2019 10:28:59.
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