Filter out reads where the read and CIGAR do not match in length
Category Read Filters
OverviewFilter out reads where the read and CIGAR do not match in length.
Note: unmapped reads pass this filter. See MappedReadFilter for criteria defining an unmapped read.
See these additional references.
GATK version 22.214.171.124 built at 25-59-2019 01:59:53.
Please sign in to leave a comment.