Metrics
Category Metrics
Overview
Holds information about CpG sites encountered for RRBS processing QC @author jgentryThis table summarizes the values that are specific to this metric.
| Metric | Summary |
|---|---|
| SEQUENCE_NAME | Sequence the CpG is seen in |
| POSITION | Position within the sequence of the CpG site |
| TOTAL_SITES | Number of times this CpG site was encountered |
| CONVERTED_SITES | Number of times this CpG site was converted (TG for + strand, CA for - strand) |
| PCT_CONVERTED | CpG CONVERTED_BASES / CpG TOTAL_BASES (fraction) |
GATK version 4.6.0.0 built at Sat, 29 Jun 2024 20:47:29 -0400.
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