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Arman Seuylemezian

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Latest activity by Arman Seuylemezian
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    Arman Seuylemezian commented,

    Got it, I was able to confirm that the callset.json file in my instance does accurately contain all the samples that are in the datastore however there is a discrepancy with the vcfheader.vcf file ...

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    Arman Seuylemezian created a post,

    Genomics DB Datastore

    REQUIRED for all errors and issues: a) GATK version used: GATK v4.2.2.0b) Exact command used: Trying to update the genomics DB datastore i have with additional samplesc) Entire program log: There i...

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    Arman Seuylemezian commented,

    Is it possible to run the mito pipeline in tumor/matched normal mode ? I imagine the way to do it would be to create a panel of normals using the tumor only mode option and then proceed with the re...