Yuwei Bao

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Latest activity by Yuwei Bao
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    Yuwei Bao created a post,

    Somatic CNV Workflow Tutorials

    REQUIRED for all errors and issues: a) GATK version used: docker image: tutorial_11682_11683:gatk4.0.1.1 b) Exact command used:  gatk --java-options "-Xmx3g" CollectAllelicCounts    \       -I s...

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    Yuwei Bao created a post,

    Create Panel of Normals Issue

    Hi everyone: I am using GATK v4.2.6.1 and I have trouble producing Panel of Normal for somatic mutation calling using the following workflow from the tutorial :   Step 1: Run Mutect2 in tumor-only ...