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Hyesun Cho

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Latest activity by Hyesun Cho
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    Hyesun Cho commented,

    1. Community
    2. Somatic
    3. Picard error (AddOrReplaceReadGroups)

    Thank you for your reply. I tried ValidateSamfile and the result was errorcode 1, and I coun't find a solution to this problem. I soled the problem by creating bam file directly from STAR.   Best R...

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    Hyesun Cho created a post,

    Picard error (AddOrReplaceReadGroups)

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    1. Community
    2. Somatic

    Picard ver : 2.27.4 command line : java -Xmx8g -jar picard.jar AddOrReplaceReadGroups -INPUT ./Sample_L1_1_380_197_2pass/Aligned.out.sam -OUTPUT ./Sample_L1_1_380_197_2pass/Aligned.out.sorted.bam -...

    • Hyesun Cho
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