Jiayi Zhao
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Activity overview
Latest activity by Jiayi Zhao-
Jiayi Zhao commented,
Hi Philipp, Thanks for your reply. Actually, I am using HaplotypeCaller, and I am going to try GenotypeGVCF. Is this a good choice? and should I conduct joint-calling on disease and control separa...
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Jiayi Zhao created a post,
Should joint-calling be performed for the control and the disease group separately?
AnsweredDear GATK Team, I have about 50 disease samples and 30 control samples, I was wondering if I should do joint-calling on these two groups separately or I should treat them as one group. Thanks, J...
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Jiayi Zhao created a post,
How to interpret INFO part of non-variant blocks in gvcf files?
AnsweredDear GATK Team, Here is a record in my gvcf file chr1 14726 . T <NON_REF> . . END=14730 GT:DP:GQ:MIN_DP:PL 0/0:1:3:1:0,3,15 I generated this by the fo...