samuel
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Latest activity by samuel-
samuel commented,
Hi @Derek Caetano-Anolles, Thanks for the clarification! I will use single sample bam from now I didn't get an out of space error when i ran the program so the missing hyphen in --conf is probably...
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samuel created a post,
Proper way to prepare .bam for MarkDuplicatesSpark
AnsweredHi folks, I am new with GATK, please advise me on the details i am missing. I am trying out the protocol for identifying SNP/indel variant from RNA-seq data. I performed a 2-passed alignment in STA...