
Rajesh Kumar Maurya
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Latest activity by Rajesh Kumar Maurya-
Rajesh Kumar Maurya commented,
The alternate contigs were retained, We could try to remove them, thanks for the suggestion. The data is generated from exome sequencing.
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Rajesh Kumar Maurya created a post,
Gene coverage issue in GATK 4.3.0.0 using GRCh38
Hi, Recently I checked the coverage of gene OCA2, using both genome HG37 and hg38. surprisingly, it was not not covered (very poorly mapped) in HG38, and full covered with good coverage in hg37 wi...
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Rajesh Kumar Maurya commented,
Im using GATK 4.2.4.0 & GRCH38, getting plenty of false calls per exome, is there problem in Haplotypecaller, please let me know?