Senwei
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Activity overview
Latest activity by Senwei-
Senwei commented,
Thank you very much
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Senwei created a post,
How do I modify the working directory of GenomicsDBImport to restart after my GenomicsDBImport job was killed ?
Dear GATK team, Recently, I want to incrementally add new GVCFs to an existing GenomicsDB datastore. When the job runs for a while, my job is killed (I didn't back up my GenomicsDB directory). I wa...
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Senwei created a post,
CombineGVCFs: How to sort the sample ID of the gvcf file header in combining gvcfs ?
Hello GATK team, I am working on gvcf combination using CombineGVCFs (GATK 4.2.0.0) for human WGS data. But the order of sample ID in gvcf header is character-sorted: #CHROM POS ID REF ...
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Senwei created a post,
Genomestrip: Argument with name '--ploidyMapFile' (-ploidyMapFile) is missing
Hello GATK team, I am working on CNV calling using Genome STRiP pipelines for human WGS data. Here I obtained a error in SVPreprocess step. Bug information is listed as follows: INFO 23:24:12,696...