zzh
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Latest activity by zzh-
zzh commented,
Hello, Genevieve How can I solve this problem
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zzh commented,
Hello, Genevieve Is there something wrong with my fastQC header file, causing the BAM file to appear chr1_KQ031383v1_fix in BAM file? Should I change the fastQC file and do it again
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zzh created a post,
Contig chr1_KQ031383v1_fix not present in the sequence dictionary
Answered$gatk --java-options "-Xmx20G -Djava.io.tmpdir=./" BaseRecalibrator -R $ref -I /PUBLIC/wes/one/SRR18056741_marked_fixed_RG.bam --known-sites $snp --known-sites $indel -O ${sampl...