chae chae
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Activity overview
Latest activity by chae chae-
chae chae commented,
yuo1996@gmail.com This is my address! I'm gonna try and check if I can get faster or convenient result for next step from it.
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chae chae commented,
Thank you for further information!! Well actually I did this preprocessing for analysis of C4 copy number which is provided in Terra workspace. Maybe it can be very helpful to deal with whole pipe...
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chae chae commented,
After 4 repetitions, I succeeded!! Now I'm trying to run with my whole samples (100 samples in a batch). Thanks a lot!! I have one more small question, Is there any option to set the number of t...
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chae chae commented,
I do not run it by 'cluster',. I mean I didnt install any workflow manager,. And I use bash scrpit to run it, like below. Is it same with running again as running the bash script again? or should ...
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chae chae commented,
I have samtools installed (lastest version ; 1.15 ) and there's no printed words in SVPreprocess-4.out.... I got the intact headers.bam/ headers.bam.bai file and I checked 'samtools index headers.b...
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chae chae commented,
I found that I used the reference bundle file "Homo_sapiens_assembly38_12Oct2016.tar.gz", so I updated the file with "Homo_sapiens_assembly38_30Aug2021.tar.gz". Then I got new errors below when I r...
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chae chae created a post,
Genomestrip preprocessing error
Hello I have done SVPreprocessing and got some errors. I succeed when I ran it with -L option with chromosomal region, but I got failed when I did it with whole chromosome without -L option. I ran ...