Joanna
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Latest activity by Joanna-
Joanna commented,
Hi all, I have a question if in the case of Canis lupus familiaris (DOG) the BQSR is needed? Thanks in advance! Joanna
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Joanna created a post,
HaplotypeCaller
Hi, I'm running GATK v 4.2.0.0 and I would like to run HaplotypeCaller with the Snakemake but sth is not working for some samples. I'm calling GATK as follows: rule HaplotypeCaller: input: ...