Avatar

Marc Crepeau

  • Total activity 5
  • Last activity
  • Member since
  • Following 0 users
  • Followed by 0 users
  • Votes 0
  • Subscriptions 2

Activity overview

Latest activity by Marc Crepeau
  • Avatar

    Marc Crepeau created a post,

    Where are the sample-level annotations?

    How do I get GATK to write the sample-level annotations to my VCF file?  Most VCF files I've worked with have a header that includes FORMAT and then the names of each of my samples.  Then each reco...

  • Avatar

    Marc Crepeau commented,

    Okay, this was my bad.  The problem was, in fact, the java version.  It worked fine when I switched to java version 1.8.  To roll my Mac back to that version I used the excellent instructions here:...

  • Avatar

    Marc Crepeau created a post,

    Cromwell stuck at WaitingForReturnCode on Mac

    I am using Cromwell version 55 on a MacBook Pro running OS 10.15.7 (Catalina).  I thought I'd learn to use Cromwell, so I started with the 5-minute introduction tutorial found here: https://cromwel...