Emila Mańko
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Activity overview
Latest activity by Emila Mańko-
Emila Mańko commented,
Hi Laura, Thank you for such quick response and sorry for delay on my side. I can confirm that we have quite good overlap between training set and input VCF confirmed both with GATK SelectVariants ...
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Emila Mańko commented,
Hi all, I am getting the same error after using the VariantRecalibrator. I have checked training set and my input VCF and both have QD present in the annotations. Do you have any idea what could ca...
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Emila Mańko created a post,
Why do I see difference in ploidy in GT field within same sample after GenotypeVCFs
Hi, as topic describes, I am writing regarding different types of ploidy in GT field in GenotypedVCF when allele call is missing. I scanned through genotyped vcf to check for patterns and distribut...