David Jaspez
- Total activity 8
- Last activity
- Member since
- Following 0 users
- Followed by 0 users
- Votes 0
- Subscriptions 2
Activity overview
Latest activity by David Jaspez-
David Jaspez commented,
Thank you so much! I will check the GitHub ticket for updates from time to time. Best regards.
-
David Jaspez commented,
Hello Genevieve, Thanks for your help. I run both --partition-type sample and --partition-type readgroup parameters in the same command and it generates all the files for sample partition but it la...
-
David Jaspez commented,
Hi Genevieve, Thanks for your help. I run the command with this option and got the same output as before: Using GATK jar /opt/gatk/4.2.0.0/gatk-package-4.2.0.0-local.jarRunning:java -Dsamjdk.use_a...
-
David Jaspez created a post,
DepthOfCoverage with -gene-list and readgroup as --partition-type options
AnsweredHi all, I’m trying to use the DepthOfCoverage tool in GATK 4.2.0.0 with the "-gene-list" option and read group as the partition-type but I get an error. If I run the same command without the "-gene...
-
David Jaspez commented,
Hi again, thank you so much! I look forward to the next release.
-
David Jaspez created a post,
DepthOfCoverage in GATK4.1.9.0 with -gene-list option
Hi all, I’m trying to use the DepthOfCoverage tool with GATK 4.1.9.0. I used the "-gene-list" option but I didn't obtain the "_gene_statistics" output. However, I obtain the "_gene_summary" output ...