WKaiser
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Activity overview
Latest activity by WKaiser-
WKaiser commented,
Hallo Genevieve Brandt, The problem is solved. I had an older, faulty and a new, correct version of the bai for the bam file in the same folder and used the older version in the command. After adju...
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WKaiser created a post,
Errors with CNNScoreVariants and HaplotypeCaller: java.nio.BufferUnderflowException
Dear GATK team, i have two problems, first i get an Error when trying to use CNNScoreVariants with 2D Model settings on a vcf file, which i created with samtools mpileup. This works, when i use CNN...
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WKaiser commented,
Hallo Genevieve Brandt, your tip solved the issue, thank you very much!
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WKaiser created a post,
CNNScoreVariants error: AttributeError: 'str' object has no attribute 'decode'
i am writing a workflow for variant discovery, when i use CNNScoreVariants i get the error: AttributeError: 'str' object has no attribute 'decode'. I attached the error log below I test the workflo...