huan wang
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Activity overview
Latest activity by huan wang-
huan wang commented,
These data were generated using tumor/normal pairs but without the use of panel or normal. Perhaps that could be a cause? I'm happy to share one T/N pair with you. What would you recommend the best...
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huan wang commented,
Our coverage for tumor normal is around 200X / 120X on WES data, using FFPE tumor with matching blood. AFs of false positive indels vary with in the range of 0.02 and 0.4 I believe. I would say ove...
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huan wang created a post,
performance of indel calling by MuTect2
AnsweredI'm interested in MuTect2 performance on indel calling. My experience in using MuTect2 in some research projects of mine is that the indel accuracy is a bit low, and a lot of the indels are false p...
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huan wang created a post,
performance of indel calling by MuTect2
AnsweredI'm interested in MuTect2 performance on indel calling. My experience in using MuTect2 in some research projects of mine is that the indel accuracy is a bit low, and a lot of the indels are false p...