
Mike Keehan
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Recent activity by Mike Keehan Sort by recent activity-
I'd like to suggest a tool that makes it easier to visualize the INFO and FORMAT fields that get computed in an unfiltered VCF. All the work that VQSR does is it "magically" shows the impact of thr...
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Hi Rachel, Are you aligning male fish or female fish? Do X and Y in three spine stickleback behave the same as mammals (cow,humans)? MarkDuplicates remove optical duplicates ie. remove multiple d...
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Dear GATK team I wonder if you could help me. I am following these best practices to produce alignments intended for structural variant calling. The recommended workflow suggests to change the PRIM...