
Mike Keehan
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Activity overview
Latest activity by Mike Keehan-
Mike Keehan commented,
I'd like to suggest a tool that makes it easier to visualize the INFO and FORMAT fields that get computed in an unfiltered VCF. All the work that VQSR does is it "magically" shows the impact of thr...
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Mike Keehan commented,
Hi Rachel, Are you aligning male fish or female fish? Do X and Y in three spine stickleback behave the same as mammals (cow,humans)? MarkDuplicates remove optical duplicates ie. remove multiple d...
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Mike Keehan commented,
Dear GATK team I wonder if you could help me. I am following these best practices to produce alignments intended for structural variant calling. The recommended workflow suggests to change the PRIM...