Brian Wiley
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Recent activity by Brian Wiley Sort by recent activity-
Mutect2 calls long deletion with absolutely zero read support
AnsweredIf you are seeing an error, please provide(REQUIRED) : a) GATK version used: 4.2.1.0b) Exact command used: /gatk/gatk Mutect2 --java-options "-Xmx8g" -O $1 -R $2 -I $3 -tumor "$TUMOR" -I $4 -norma...
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Question GetPileupSummaries, columns all 0
If you are seeing an error, please provide(REQUIRED) : a) GATK version used: 4.1.9.0b) Exact command used: gatk GetPileupSummaries -I ../SRR10022835.md.bam -V $breast/chr17.af-only-gnomad.raw.sit...