Jason Ni
- Total activity 11
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Activity overview
Latest activity by Jason Ni-
Jason Ni created a post,
Jointgenotyping Genomicsdbimport failed for no obvious reasons
Hi! I've been trying to do the joint genotying with VSQR corrections using the pipeline on https://dockstore.org/workflows/github.com/broadinstitute/warp/JointGenotyping:JointGenotyping_v1.5.1?tab=...
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Jason Ni commented,
Hi Bob Thanks for the reply. It would be great if we could correspond through email. I wonder what you're email address is as I couldn't find it on GATK on Broad's website. To answer your question...
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Jason Ni commented,
[latest development]:By inspecting the scripts, I took my best educated guess on a sequence of scripts: 1. run gs_preprocess.wdl on each sample 2. run gs_run_cnv_pipeline.wdl on each metadata.zip 3...
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Jason Ni created a post,
Potential guidance on GenomeSTRiP CNV discovery on Anvil Terra app
Hi, I've currently been trying to run GenomeSTRiP CnvDiscoveryPipeline on Terra. I'm trying to find the correct sequence of workflows to go through. I couldn't match the wdl scripts on Firecloud w...