Kountay Dwivedi
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Converting .bam to .fq and vice versa
AnsweredHow do I convert a .bam to .fq and vice versa without losing any data? That is, after conversion, I do not lose any original data or get any modified output (like change in read quality sqore). I ...
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Where do I find sample dataset for practice?
AnsweredHi all, I am a Junior researcher, and I need to familiarise myself with GATK Best Practices. I went to the following link to start with Phase 1- Data Pre-processing (https://gatk.broadinstitute.org...
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What are the initial files required in order to go through the Data Preprocessing, Variant Discovery and IGV phases of Genomic analysis?
AnsweredHello, I am using GATK4 and I have downloaded and installed all the prior tools needed for the pipeline (Picard, BWA, SAM). Please pardon my question if it is not proper. According to the tutorials...