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3. How to filter the results of svgenotype

hello      for [One common way to do association tests is to test the association of copy number (as a continuous quantity) to phenotype],i don't understand ,      Which software can test the corre...

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• termius
• November 04, 2020 08:23
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1. Community
2. Germline
3. How to filter the results of svgenotype

Hello ###example  20 1009500 CNV_20_1009500_1022750 T <CNV> . PASS END=1022750;GCFRACTION=0.33;GCLENGTH=13251;GLALTFREQ=NA;GLALTSUM=0.000;GLHETSUM=0.000;GLINBREEDINGCOEFF=NA;GLREFFREQ=NA;GLREFSUM=0...

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• termius
• September 09, 2020 05:53
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3. ERROR MESSAGE: No gender data for sample:sample7

for ./chr1/RUN/metadata/sample_gender.report.txt ,It's an empty file, nothing.  

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• termius
• August 09, 2020 09:24
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3. ERROR MESSAGE: No gender data for sample:sample7

using svdiscovery  pipeline for version svtoolkit_2.00.1949   

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• termius
• August 06, 2020 10:48
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