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3. how to combine mutect2 and haplotypecaller vcfs from the same sample

Hi Genevieve, I am going to give that a try, thanks for the insight. Have a nice weekend, Yanick

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• Yanick Paco Hagemeijer
• September 24, 2021 16:37
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1. Community
2. Special GATK Use Cases
3. how to combine mutect2 and haplotypecaller vcfs from the same sample

Thanks for the quick reply! I would expect the latter (a multi sample VCF). I cannot even begin to imagine the complexity of having to fold those 2 files into a chimera sample. I would like to filt...

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• Yanick Paco Hagemeijer
• September 23, 2021 23:46
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1. Community
2. Special GATK Use Cases
3. how to combine mutect2 and haplotypecaller vcfs from the same sample

Hi Genevieve, Sorry and thanks for correcting that. Greetings. Yanick

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• Yanick Paco Hagemeijer
• September 23, 2021 18:25
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Hi,As I am working from home I am running up against a problem with downloading big files, most of the vcf files from the hg38 resource bundle are provided as .vcf.gz, but not the biggest 2, which ...

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• Yanick Paco Hagemeijer
• August 02, 2021 16:34
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