Genevieve Brandt (she/her)
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Have there been any efforts or thoughts about creating an open source GPU accelerated version of DRAGMAP?
Have there been any efforts or thoughts about creating an open source GPU accelerated version of DRAGMAP? "That's definitely something under consideration as we look at how we can make our tools mo...
Has there been any validation done on WES data?
"Has there been any validation done on WES data?" "We have not been running functional equivalence evaluation for exomes. We have only looked at whole genomes at this point. We expect the results t...
Where can I find DRAGMAP Documentation?
Where can I find DRAGMAP Documentation? There is the DRAGMAP Documentation on github: https://github.com/Illumina/DRAGMAP There is also an article on the Broad site about DRAGMAP: https://gatk.broa...
DRAGEN-GATK HaplotypeCaller options
"A clarification with some of the questions. DRAGEN-GATK is not a whole separate new tool, it's a configuration of existing tools. Just to clarify with the question about documentation regarding Ha...
What are the plans for expanding DRAGEN-GATK to somatic variants?
"What are the plans for expanding DRAGEN-GATK to somatic variants?" "Illumina and the Broad are laying out our roadmap for our future innovations that we are going to be doing together. That's one ...
Are the functional equivalence results for germline or somatic?
"Are the functional equivalence results available to view outside of Terra? Are they for somatic variants or germline variants or both?" "In the blog post that has been published on the DRAGEN-GATK...
What are the upcoming plans for DRAGEN-GATK?
What are the upcoming plans for DRAGEN-GATK? Or is it too early to know? "I think it's probably a little early for that. We've just had a big release. We would love to get people's feedback on if t...
Any comment on panel seq in regards to downstream processing for DRAGEN-GATK?
Any comment on panel seq in regards to downstream processing for DRAGEN-GATK? "I'm not sure entirely what the user is referencing. It sounds like a use case that is not something we have focused on...
DRAGEN-GATK Webinar Recording
The video is up! https://www.youtube.com/watch?v=zpw1TIFTjUI
DRAGEN-GATK Webinar - Call for questions!
Hi everyone! Please post your questions in this GATK Forum topic for the upcoming DRAGEN-GATK Webinar on December 2nd at 10 am EST. We will use your topics of interest to plan what we cover during...