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brian miller

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Latest activity by brian miller
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    brian miller commented,

    When I run the following on the jar file it says that I am using version 4: [millebri@exahead1 wgs_variant_calls]$ java -jar /home/groups/prime-seq/pipeline_tools/bin/GenomeAnalysisTK4.jar --versio...

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    brian miller created a post,

    humanG1Kv37 to hg38 liftover issues

    Hey there, I am trying to lift over a set of older vcf files that were made using humanG1Kv37 (human_g1k_v37.fasta) to hg38. There seems to be an issue with the names of the contigs in the chain fi...