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Sanat Mishra

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Latest activity by Sanat Mishra
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    Sanat Mishra created a post,

    Output of PossibleDeNovo

    Answered

    What is the expected output after using PossibeDeNovo as an annotation? I applied it on a trio VCF file but didn't see any changes in the output file as compared to the input, please let me know.

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    Sanat Mishra commented,

    I ran this outside Docker and it worked. I think there was some problem with reading files when inside the container.

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    Sanat Mishra created a post,

    Can't open VCF File

    Hey!I am trying to apply filters to a certain VCF file, however, it keeps returning that the VFC file is not readable or doesn't exist.  What do I do? (gatk) root@07f32a086bc6:/gatk#  gatk VariantF...