hjwang
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Latest activity by hjwang-
hjwang commented,
And I checked my environment variable, the parameter is displayed as ' declare -x TILEDB_DISABLE_FILE_LOCKING="1" '
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hjwang commented,
Hi,Bhanu! Is the command I entered like this： TILEDB_DISABLE_FILE_LOCKING=1 gatk GenomicsDBImport -V SRR630877.erc.g.vcf -V SRR630496.erc.g.vcf \--genomicsdb-workspace-path my_database --intervals ...
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hjwang commented,
This is the result of GenomicsDBImport -[ 201] callset.json-[4.0K] chr22$1$50818468|-[4.0K] __3d7b0c29-9d8b-4748-a08a-c1e0a9136cf647572466251520_1590412882146||-[133K] AD.tdb||-[ 54K] AD_var.tdb||-...
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hjwang created a post,
Cannot lock consolidation filelock; Cannot lock.
Hi ! When I use GenomicsDBImport and GenotypeGVCFs , I get the following error, I have no problem with running CombineGVCFs with CombineGVCFs, but CombineGVCFs is too slow. a) GATK version used : ...