Manoj Kumar

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Recent activity by Manoj Kumar Sort by recent activity Recent activity Votes
  • Not getting vcf file

    I am trying following commands to generate vcf file from HISAT2 generated alignment .sam file. I tried a lot but I am not able to figure out the issue. please advice. Command: ./gatk --java-options...

  • ERROR while calling variants...

    I am using gatk- version with following command, however I am getting error. please advice.... Command: gatk-$./gatk HaplotypeCaller -R /home/kumarm/allan-work/RNASEq-alignment/ref_se...