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krunal pawar

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Latest activity by krunal pawar
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    krunal pawar commented,

    1. Community
    2. Non-Human
    3. HaplotypeCaller for denovo RNAseq output

    Bhanu Gandham i checked but i dint get the answer can you please tell me the thread? My question is why the all ALT (non ref) and how i can get the right result? No where in my file ALT has any oth...

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    krunal pawar created a post,

    HaplotypeCaller for denovo RNAseq output

    1. Community
    2. Non-Human

    Can you please provide a) GATK version used : 4.1.7b) Exact GATK commands used: ./gatk --java-options '-DGATK_STACKTRACE_ON_USER_EXCEPTION=true' HaplotypeCaller -R Jatropa.fna -I Sample_A_SplitNcig...

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