Tyler Medina
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Recent activity by Tyler Medina Sort by recent activity-
Can you explain what CpCG -> CpCA refers to in this context? I can't find any information in your documentation about what this refers to.
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Hi again, I think I found my answer in Github open issue 5793. Long story short, looks like the QUAL score filtering is performed per-allele. Alleles that fail are removed, but the output QUAL scor...
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Hi Bhanu, I've rerun a batch using GATK/4.1.7.0, and I'm still seeing the same effect. In this particular batch: 28 variants were 'missing' when run with my additional control sample. > of thes...