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FGV

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    FGV created a post,

    GATK GenotypeGVCFs changes HET to REF_ALT

    Dear all, I've been using GATK HaplotypeCaller / GenotypGVFs (v4.2.4.0) for a while but, recently found something strange. There is a position (7063) with 8 reads (3T + 5A) that, even though Haplot...