
Antti Koskenalho
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Activity overview
Latest activity by Antti Koskenalho-
Antti Koskenalho commented,
Thanks for the confirmation!
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Antti Koskenalho created a post,
Which gnomAD version is used for somatic-hg38_af-only-gnomad.hg38.vcf.gz
Hi, Which gnomAD version is used for creating the somatic-hg38_af-only-gnomad.hg38.vcf.gz file found from https://console.cloud.google.com/storage/browser/gatk-best-practices/somatic-hg38?pli=1. I'...
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Antti Koskenalho commented,
David, thank you very much for confirming this!
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Antti Koskenalho created a post,
How to find or generate common germline variant sites VCF required by GetPileupSummaries
Hi, I'm trying to follow "(How to) Call somatic mutations using GATK4 Mutect2"(https://gatk.broadinstitute.org/hc/en-us/articles/360035531132), and I'm using the latest GATK 4.1.7.0. So far the tut...