2tong
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Activity overview
Latest activity by 2tong-
2tong created a post,
How to make a 1kg_ref_panel_v1.ped?
Recently, I just want to use ：gs://gcp-public-data--broad-references/hg38/v0/sv-resources/ref-panel/1KG/v1/ped/1kg_ref_panel_v1.ped. The content is as follows: ``` HG00129 HG00129 0 0 1 0HG00140 HG...
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2tong created a post,
A JAVA Error when running GATKSVPipelineBatch.wdl with GATKSVPipelineBatch.ref_panel_1kg.json
Can you please provide a) GATK version used b) Exact GATK commands used c) The entire error log if applicable. To whom it may concern: When I try to test the GATKSVPipelineBatch.wdl with GATKSVPipe...
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2tong created a post,
How to call Spark-enable GATK tools with those GATK tools not support Spark in a WDL file?
Dear GATK Team， I want to know if it is possible to call Spark-enable GATK tools with those GATK tools not support Spark in a WDL file. If I can do this, can you give some examples or some ...