warren kretzschmar

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Latest activity by warren kretzschmar
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    warren kretzschmar created a post,

    Typo in VQSR tutorial

    Can you please provide a) GATK version used v4.1.4.0 I believe there is a typo in the commands in sections 1.C and 1.D in the tutorial https://gatk.broadinstitute.org/hc/en-us/articles/360035531112...

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    warren kretzschmar commented,

    Hi Geraldine, that is helpful. Thank you.

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    warren kretzschmar commented,

    I am finding the tool docs for GATK3.8 very impractical to use. Below is what I see when I try to find the documentation for indel realignment (and yes, indel realignment is still a very useful too...