Jose Arcadio Buendia
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Out of memory error using OpenJDK vs Oracle JDK for CNV-LOH
Previously I have been able to run the CNV-LOH pipeline with no problems whatsoever. However recently Oracle JDK made a change to their license that has prevented our institution from using their s...
GATK Liftover memory issues on cohort vcfAnswered
Dear GATK team, I've been attempting to LiftOver a chromosome from the 1000 genomes cohort going from hg38 to hg37. However, I keep running into memory errors. Do I just need to throw more heap ...