
jungmin choi
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Recent activity by jungmin choi Sort by recent activity-
I am no longer reproducing the bamout errors. It must have been a syntax mistake on my side. Please disregard my question. Thanks!
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David Benjamin Thanks for confirming this. I am also getting errors when I specify -bamout parameter like below. Is this expected as well? -bamout <pair>/gatk4.1_multisample/<pair>.mutect2.<chu...
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David Benjamin I am a bit perplexed to see the results like below. The order of the samples is tumor1, normal, and tumor2 from the same patient. Is the tool genotyping the tumor automatically heter...
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David Benjamin Thank you and great to have the latest Mutect2 documentation now.