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Erika Salvi

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Latest activity by Erika Salvi
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    Erika Salvi created a post,

    HaplotypeCaller: data generated from amplicon sequencing 

    1. Community
    2. Germline

    Hello, I'm using GATK 4.1.4.1. I performed: 1. alignment with BWA mem 2. GATK BQSR 3. HaplotypeCaller GVCF mode gatk --java-options "-Xmx4G" HaplotypeCaller -R hg19.fa -I file_recal_reads.bam --emi...

    • Erika Salvi
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