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Matthias De Smet

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Latest activity by Matthias De Smet
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    Matthias De Smet created a post,

    How do I get intermediate outputs from cromwell

    If you are seeing an error, please provide(REQUIRED) : a) GATK version used: NAb) Exact command used:  NAc) Entire error log: NAHi, I'm developing a workflow, which strings together a bunch of subw...

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    Matthias De Smet commented,

    Hi, Since early November has passed into early December, are there any updates on a possible release?   Thanks

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    Matthias De Smet created a post,

    Sampletracking workflow using picard

    Hi, I was intrigued by the "Detecting sample swaps with picard tools" blogpost (https://gatk.broadinstitute.org/hc/en-us/articles/360041696232-Detecting-sample-swaps-with-Picard-tools) and I was wo...

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    Matthias De Smet created a post,

    Where's the DRAGEN?

    Hi,   In a post on the old forum(https://gatkforums.broadinstitute.org/gatk/discussion/24466/enter-the-dragen-gatk), there was an announcement of a collaboration between Broad and Illumina to open ...