- Total activity 8
- Last activity
- Member since
- Following 0 users
- Followed by 0 users
- Votes 1
- Subscriptions 3
PostsVotes on activity by whynot Sort by votes
Mutect2 : annotation group & fields that can check strand bias
Hi :) I want to check the strand bias in the vcf file. So I check default annotation (group). > Mutect2 : Default annotation group = [StandardMutectAnnotation] > HaplotypeCaller : Default annotat...
What is the 'physical phasing'
Hi I wonder about PGT of VCF format field. According to the meta-information line, ##FORMAT=<ID=PGT,Number=1,Type=String,Description="Physical phasing haplotype information, describing how the al...
Mutect2 filter : clustered_events definitionAnswered
Hi. I'm student who study bioinformatics. I make some vcf files using GATK3.6 tumor only mode. I wonder about 'clustered_events' filter's definition. According to the vcf meta-information line, ...