Derek Caetano-Anolles
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DRAGEN-GATK
DRAGEN-GATK is here! Combining Illumina's hardware accelerated data analysis platform with the Broad Institute's variant discovery pipelines, DRAGEN-GATK takes two great things and makes them even ...
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Instructions for GATK workshops
Preparing for the workshop To follow these instructions and attend the workshop, you will need to have a basic understanding of the meaning of the following words and command-line operations. If y...
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Hosting Requirements for a Workshop
Expenses The host must pay for all expenses incurred by the training crew that falls under these categories: air travel (in economy class for flights durations <4 hours and economy plus/extra legr...
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What's in a GATK workshop?
What's in a GATK workshop? The term "workshop" is used all over the place to describe very different things. In the GATK world, a workshop is a multi-day course that includes both lectures and han...
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🗓️ GATK Workshop in San José, Costa Rica [Feb. 11-14, 2020]
On February 11-14, 2020, instructors from the Broad Institute taught a 4-day GATK course at the Universidad de Costa Rica in San José, Costa Rica. The goal of this workshop was to teach the tools i...
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🗓️ GATK Workshop in Gujarat, India [Mar. 2-5, 2020]
On March 2-5, 2020, instructors from the Broad Institute taught a 4-day GATK course in Gujarat, India. The goal of this workshop was to teach the tools in GATK used for both Germline and Somatic an...
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🗓️ Mutect2 Webinar [Nov 17 2020]
On November 17, 2020, instructors from the Broad Institute taught a 1-hr virtual webinar open to the GATK community. In this webinar, you will learn about how Mutect2 works, and see an example of h...
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🗓️ DRAGEN-GATK Webinar [Dec. 2, 2021]
On December 2, 2021, instructors from the Broad Institute taught a 1-hr virtual webinar open to the GATK community, with guests from Illumina joining to present and and answer questions. It was hos...
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DRAGEN-GATK Webinar [December 3, 2021]
In this webinar, participants learned about the whats, hows, and whys of this partnership between the Broad and Illumina, with representative experts from each institution. This webinar was origin...
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🗓️ DRAGEN-GATK Webinar [Oct. 21, 2022]
This October 21, join us for an interactive online workshop on Whole-Genome Analysis with DRAGEN-GATK! In this webinar, you will get the opportunity to will learn what it is, why it exists, and ho...