Eduardo Maury
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Recent activity by Eduardo Maury Sort by recent activity-
it seems that it worked!
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Still an error: workspace-id: b266996d-0c10-45f7-bd1c-39cb4eef6aa5submission-id: d4687ece-dac4-4b13-98de-bdc4bc2fb5d3
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Still with error. I don't think we are able to allocate 800GB for a tast on terra. workspace-id: b266996d-0c10-45f7-bd1c-39cb4eef6aa5submission-id: f4a815ce-e540-470a-839e-431848993ef4
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Not sure which recommendation specific you are referring to since we tried many on the comment linked. Which one are you referring to?
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So with the new specifications one of the samples ran to completion. However, there is still an error with one of the samples, although now it is able to pass the markduplicates step. workspace-...
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Currently trying to run with these parameters. I have mentioned this in the past, but in the short term is there a pipeline that could just get me the bwa aligned bams? I really just need to re-ali...
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Is the question above addressed to me?
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Still with errors using inflater/deflater workspace-id: b266996d-0c10-45f7-bd1c-39cb4eef6aa5submission-id: 23aed5a9-2cb0-403e-b1d9-db351e2c02f3
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That is correct. I just re-ran with the correct version and disabling snappy. There is still an error. Here is the run information: workspace-id: b266996d-0c10-45f7-bd1c-39cb4eef6aa5submission-id:...
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The WDL error would have been caught by the compiler that stores the WDL scripts as it runs proper formatting. This error has not been reported on previous times I ran the code. Not sure what the e...