Arvind Ravi

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Recent activity by Arvind Ravi Sort by recent activity Recent activity Votes
  • Mutect2 LearnReadOrientationModel Memory Error

    Hi, I am running into a memory problem with the LearnReadOrientationModel in a large Mutect2 scatter job. I am performing multisample calling with 50 8X whole genomes scattered 300 ways. I was init...

  • Mutect2 for ultrasensitive low coverage calling

    Can you please provide a) GATK version used NA b) Exact GATK commands used NA c) The entire error log if applicable. NA   I am trying to perform mutation calling on 50 6-8X whole genomes correspon...